Clostridium_G tetani
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_G; s__Clostridium_G tetani
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium tetani
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium tetani
NCBI Strain Identifiers C2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900167265.1)
Genome Characteristics
CheckM Completeness 98.28%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 39
N50 Contigs 263,508 bp
Longest Contig 563,899 bp
Scaffold Count 35
N50 Scaffolds 263,508 bp
Longest Scaffold 594,914 bp
Genome Size 2,829,019 bp
Protein Count 2,782
Coding Density 88.41%
GC Percentage 28.46%
Ambiguous Bases 52
GTDB representative GCA_900167265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM76233v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03018573
Country USA: Massachusetts
Date 2014-10-2
Genbank Assembly Accession GCA_000762335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,734
Refseq Category na
Seq Rel Date 2014/10/02
Spanned Gaps 4
Species Taxid 1513
SSU Count 3
Submitter FDA, Center for Biologics Evaluation and Research
Taxid 1513
Total Gap Length 222
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JRGG00000000.1