Methanobacterium formicicum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Methanobacteriota; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium; s__Methanobacterium formicicum
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium; s__Methanobacterium formicicum
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Methanomada group; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium; s__Methanobacterium formicicum
NCBI Strain Identifiers BRM9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001316325.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 2,449,987 bp
Longest Contig 2,449,987 bp
Scaffold Count 1
N50 Scaffolds 2,449,987 bp
Longest Scaffold 2,449,987 bp
Genome Size 2,449,987 bp
Protein Count 2,403
Coding Density 83.49%
GC Percentage 41.34%
Ambiguous Bases N/A
GTDB representative GCA_001316325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM76226v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03085433
Country New Zealand
Date 2014-10-2
Genbank Assembly Accession GCA_000762265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rumen contents
Latitude Longitude 40.3350 S 175.6117 E
Molecule Count 1
CDS Count 2,367
Refseq Category representative genome
Seq Rel Date 2014/10/02
Spanned Gaps 0
Species Taxid 2162
SSU Count 2
Submitter PGgRc
Taxid 2162
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None