Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Oenococcus; s__Oenococcus oeni
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Oenococcus; s__Oenococcus oeni
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Oenococcus; s__Oenococcus oeni; x__Oenococcus oeni IOEB_C52
NCBI Strain Identifiers IOEB_C52
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000372485.1)
Genome Characteristics
CheckM Completeness 97.86%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 48
N50 Contigs 101,748 bp
Longest Contig 369,466 bp
Scaffold Count 48
N50 Scaffolds 101,748 bp
Longest Scaffold 369,466 bp
Genome Size 1,903,774 bp
Protein Count 1,919
Coding Density 88.36%
GC Percentage 37.64%
Ambiguous Bases 19
GTDB representative GCA_000372485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Oeoe_IOEB_C52_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02904288
Country France
Date 2014-10-1
Genbank Assembly Accession GCA_000762045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Cider
Latitude Longitude None
Molecule Count N/A
CDS Count 1,881
Refseq Category na
Seq Rel Date 2014/10/01
Spanned Gaps 0
Species Taxid 1247
SSU Count 1
Submitter Institut des Sciences de la Vigne et du Vin
Taxid 1428425
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZLF00000000.1