Prochlorococcus marinus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__PCC-6307; f__Cyanobiaceae; g__Prochlorococcus; s__Prochlorococcus marinus
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus; x__Prochlorococcus marinus str. SS51
NCBI Strain Identifiers SS51
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000007925.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 12
N50 Contigs 232,789 bp
Longest Contig 468,464 bp
Scaffold Count 12
N50 Scaffolds 232,789 bp
Longest Scaffold 468,464 bp
Genome Size 1,746,977 bp
Protein Count 1,914
Coding Density 88.86%
GC Percentage 36.43%
Ambiguous Bases N/A
GTDB representative GCA_000007925.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM76035v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769571
Country None
Date 2014-9-29
Genbank Assembly Accession GCA_000760355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ocean
Latitude Longitude 28.98 N 64.35 W
Molecule Count N/A
CDS Count 1,880
Refseq Category na
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 1219
SSU Count 2
Submitter MIT
Taxid 167554
Total Gap Length 0
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNBD00000000.1