Prochlorococcus_A marinus_I
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Synechococcales; f__Cyanobiaceae; g__Prochlorococcus_A; s__Prochlorococcus_A marinus_I
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus; x__Prochlorococcus marinus str. MIT 9401
NCBI Strain Identifiers MIT 9401
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.41%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 17
N50 Contigs 110,519 bp
Longest Contig 474,619 bp
Scaffold Count 17
N50 Scaffolds 110,519 bp
Longest Scaffold 474,619 bp
Genome Size 1,666,808 bp
Protein Count 1,925
Coding Density 90.69%
GC Percentage 31.21%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM76009v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769561
Country None
Date 2014-9-29
Genbank Assembly Accession GCA_000760095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ocean
Latitude Longitude 35.5 N 70.4 W
Molecule Count 0
Protein Count 1,822
Refseq Category na
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 1219
SSU Count 1
Submitter MIT
Taxid 167551
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNAR00000000.1