Prochlorococcus_A marinus_M
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__PCC-6307; f__Cyanobiaceae; g__Prochlorococcus_A; s__Prochlorococcus_A marinus_M
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus; x__Prochlorococcus marinus str. MIT 9302
NCBI Strain Identifiers MIT 9302
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 17
N50 Contigs 242,124 bp
Longest Contig 383,692 bp
Scaffold Count 17
N50 Scaffolds 242,124 bp
Longest Scaffold 383,692 bp
Genome Size 1,745,343 bp
Protein Count 1,983
Coding Density 89.43%
GC Percentage 31.12%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM75997v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769556
Country None
Date 2014-9-29
Genbank Assembly Accession GCA_000759975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ocean
Latitude Longitude 34.76 N 66.19 W
Molecule Count N/A
CDS Count 1,890
Refseq Category na
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 1219
SSU Count 1
Submitter MIT
Taxid 74545
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNAM00000000.1