Prochlorococcus_A marinus_N
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Synechococcales; f__Cyanobiaceae; g__Prochlorococcus_A; s__Prochlorococcus_A marinus_N
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus; x__Prochlorococcus marinus str. MIT 9123
NCBI Strain Identifiers MIT 9123
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 18
N50 Contigs 137,374 bp
Longest Contig 307,275 bp
Scaffold Count 18
N50 Scaffolds 137,374 bp
Longest Scaffold 307,275 bp
Genome Size 1,697,748 bp
Protein Count 1,959
Coding Density 89.44%
GC Percentage 31.02%
Ambiguous Bases 0
GTDB representative GCF_000759855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM75993v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769554
Country None
Date 2014-9-29
Genbank Assembly Accession GCA_000759935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ocean
Latitude Longitude 15 S 135 W
Molecule Count 0
Protein Count 1,859
Refseq Category na
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 1219
SSU Count 1
Submitter MIT
Taxid 167545
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNAK00000000.1