Prochlorococcus_A pastoris
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__PCC-6307; f__Cyanobiaceae; g__Prochlorococcus_A; s__Prochlorococcus_A pastoris
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus; x__Prochlorococcus marinus str. EQPAC1
NCBI Strain Identifiers EQPAC1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000011465.1)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 8
N50 Contigs 328,627 bp
Longest Contig 554,753 bp
Scaffold Count 8
N50 Scaffolds 328,627 bp
Longest Scaffold 554,753 bp
Genome Size 1,654,739 bp
Protein Count 1,922
Coding Density 90.09%
GC Percentage 30.79%
Ambiguous Bases 1
GTDB representative GCA_000011465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM75987v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769549
Country None
Date 2014-9-29
Genbank Assembly Accession GCA_000759875.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ocean
Latitude Longitude 0 N 180 W
Molecule Count N/A
CDS Count 1,799
Refseq Category na
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 1219
SSU Count 1
Submitter MIT
Taxid 190047
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNAG00000000.1