Prochlorococcus_A marinus_N
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Synechococcales; f__Cyanobiaceae; g__Prochlorococcus_A; s__Prochlorococcus_A marinus_N
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus; x__Prochlorococcus marinus str. MIT 9116
NCBI Strain Identifiers MIT 9116
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 0.68%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 22
N50 Contigs 117,620 bp
Longest Contig 250,154 bp
Scaffold Count 22
N50 Scaffolds 117,620 bp
Longest Scaffold 250,154 bp
Genome Size 1,685,398 bp
Protein Count 1,945
Coding Density 89.49%
GC Percentage 31.01%
Ambiguous Bases 0
GTDB representative GCF_000759855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM75986v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769553
Country None
Date 2014-9-29
Genbank Assembly Accession GCA_000759865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ocean
Latitude Longitude 15 S 135 W
Molecule Count 0
Protein Count 1,840
Refseq Category na
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 1219
SSU Count 1
Submitter MIT
Taxid 167544
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNAJ00000000.1