Prochlorococcus_A marinus_N
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Synechococcales; f__Cyanobiaceae; g__Prochlorococcus_A; s__Prochlorococcus_A marinus_N
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus marinus; x__Prochlorococcus marinus str. MIT 9107
NCBI Strain Identifiers MIT 9107
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 13
N50 Contigs 170,362 bp
Longest Contig 322,433 bp
Scaffold Count 13
N50 Scaffolds 170,362 bp
Longest Scaffold 322,433 bp
Genome Size 1,699,937 bp
Protein Count 1,948
Coding Density 89.41%
GC Percentage 31.02%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM75985v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769552
Country None
Date 2014-9-29
Genbank Assembly Accession GCA_000759855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Ocean
Latitude Longitude 15 S 135 W
Molecule Count 0
Protein Count 1,851
Refseq Category representative genome
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 1219
SSU Count 1
Submitter MIT
Taxid 59921
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNAI00000000.1