Citrobacter freundii
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; x__Citrobacter freundii complex; s__Citrobacter freundii; x__Citrobacter freundii NBRC 12681
NCBI Strain Identifiers NBRC 12681
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_900635425.1)
Genome Characteristics
CheckM Completeness 99.9%
CheckM Contamination 0.5%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 48
N50 Contigs 288,133 bp
Longest Contig 445,753 bp
Scaffold Count 48
N50 Scaffolds 288,133 bp
Longest Scaffold 445,753 bp
Genome Size 4,902,704 bp
Protein Count 4,621
Coding Density 89.02%
GC Percentage 51.66%
Ambiguous Bases N/A
GTDB representative GCA_900635425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM75973v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00018684
Country None
Date 2014-9-25
Genbank Assembly Accession GCA_000759735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,757
Refseq Category na
Seq Rel Date 2014/09/25
Spanned Gaps 0
Species Taxid 546
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1114920
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBMV00000000.1