Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Massilia; s__Massilia sp000759615
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Oxalobacteraceae; g__Massilia; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Oxalobacteraceae; g__Massilia; s__Massilia sp. JS1662
NCBI Strain Identifiers JS1662
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.75%
CheckM Contamination 1.81%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 7
tRNA Count 20
Contig Count 437
N50 Contigs 160,265 bp
Longest Contig 439,077 bp
Scaffold Count 437
N50 Scaffolds 160,265 bp
Longest Scaffold 439,077 bp
Genome Size 7,356,926 bp
Protein Count 6,575
Coding Density 92.08%
GC Percentage 66.17%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM75961v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02903339
Country USA
Date 2014-9-29
Genbank Assembly Accession GCA_000759615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Peanut rhizosphere
Latitude Longitude None
Molecule Count N/A
CDS Count 6,543
Refseq Category na
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 1519190
SSU Count 2
Submitter Georgia Institute of Technology
Taxid 1519190
Total Gap Length 0
Translation Table 11
tRNA Count (total) 69
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPQD00000000.1