Pseudomonas_E cremoricolorata_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E cremoricolorata_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas cremoricolorata
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas cremoricolorata
NCBI Strain Identifiers ND07
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.75%
CheckM Contamination 0.59%
CheckM Strain Heterogeneity 33.33
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 4,780,403 bp
Longest Contig 4,780,403 bp
Scaffold Count 1
N50 Scaffolds 4,780,403 bp
Longest Scaffold 4,780,403 bp
Genome Size 4,780,403 bp
Protein Count 4,277
Coding Density 89.39%
GC Percentage 63.24%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM75953v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03068908
Country Malaysia
Date 2014-9-29
Genbank Assembly Accession GCA_000759535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Waterfall
Latitude Longitude None
Molecule Count 1
CDS Count 4,256
Refseq Category na
Seq Rel Date 2014/09/29
Spanned Gaps 0
Species Taxid 157783
SSU Count 6
Submitter UNIVERSITY OF MALAYA
Taxid 157783
Total Gap Length 0
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None