Lactobacillus_F paraplantarum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus_F; s__Lactobacillus_F paraplantarum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum
NCBI Strain Identifiers L-ZS9
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 3.09%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 40
N50 Contigs 136,157 bp
Longest Contig 412,484 bp
Scaffold Count 40
N50 Scaffolds 136,158 bp
Longest Scaffold 412,484 bp
Genome Size 3,119,721 bp
Protein Count 2,916
Coding Density 83.40%
GC Percentage 43.89%
Ambiguous Bases 0
GTDB representative GCF_001435655.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM75814v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02893814
Country China
Date 2014-9-25
Genbank Assembly Accession GCA_000758145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source superior fermented meat
Latitude Longitude None
Molecule Count 0
Protein Count 2,934
Refseq Category na
Seq Rel Date 2014/09/25
Spanned Gaps 3
Species Taxid 60520
SSU Count 1
Submitter China Agricultural University
Taxid 60520
Total Gap Length 3
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPEB00000000.1