Yersinia enterocolitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers YEF
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 99.95%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 3
N50 Contigs 3,930,260 bp
Longest Contig 3,930,260 bp
Scaffold Count 2
N50 Scaffolds 4,579,828 bp
Longest Scaffold 4,579,828 bp
Genome Size 4,645,798 bp
Protein Count 4,225
Coding Density 84.96%
GC Percentage 47.28%
Ambiguous Bases 3
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name YEF
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02887299
Country None
Date 2014-9-16
Genbank Assembly Accession GCA_000755045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,289
Refseq Category na
Seq Rel Date 2014/09/16
Spanned Gaps 1
Species Taxid 630
SSU Count 6
Submitter Los Alamos National Laboratory
Taxid 630
Total Gap Length 100
Translation Table 11
tRNA Count (total) 79
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPDU00000000.1