Flavobacterium psychrophilum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum; x__Flavobacterium psychrophilum FPG101
NCBI Strain Identifiers FPG101
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002217405.1)
Genome Characteristics
CheckM Completeness 99.29%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 2,835,130 bp
Longest Contig 2,835,130 bp
Scaffold Count 1
N50 Scaffolds 2,835,130 bp
Longest Scaffold 2,835,130 bp
Genome Size 2,835,130 bp
Protein Count 2,486
Coding Density 86.91%
GC Percentage 32.56%
Ambiguous Bases N/A
GTDB representative GCA_002217405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM75436v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03290989
Country Canada
Date 2014-9-12
Genbank Assembly Accession GCA_000754365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fish with kidney; systemic disease
Latitude Longitude None
Molecule Count 1
CDS Count 2,468
Refseq Category na
Seq Rel Date 2014/09/12
Spanned Gaps 0
Species Taxid 96345
SSU Count 6
Submitter Ontario Veterinary College, University of Guelph
Taxid 1452725
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None