Clostridium sp000753455
Isolate MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sp000753455
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium sp. CL-2
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 96.77%
CheckM Contamination 5.11%
CheckM Strain Heterogeneity 53.85
5S Count 11
16S Count 4
23S Count 3
tRNA Count 20
Contig Count 26
N50 Contigs 481,943 bp
Longest Contig 1,551,128 bp
Scaffold Count 10
N50 Scaffolds 3,771,176 bp
Longest Scaffold 3,771,176 bp
Genome Size 4,076,923 bp
Protein Count 3,797
Coding Density 86.61%
GC Percentage 29.16%
Ambiguous Bases 34
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Clostridium jeddahtimonense
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2697682
Country None
Date 2014-9-6
Genbank Assembly Accession GCA_000753455.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,737
Refseq Category na
Seq Rel Date 2014/09/06
Spanned Gaps 16
Species Taxid 1499684
SSU Count 6
Submitter URMITE
Taxid 1499684
Total Gap Length 18036
Translation Table 11
tRNA Count (total) 122
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CCNP00000000.1