Rickettsia buchneri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia buchneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia tamurae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; x__Rickettsieae; g__Rickettsia; x__spotted fever group; s__Rickettsia tamurae
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000696365.1)
Genome Characteristics
CheckM Completeness 97.48%
CheckM Contamination 2.1%
CheckM Strain Heterogeneity 14.29
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 27
N50 Contigs 132,848 bp
Longest Contig 319,774 bp
Scaffold Count 27
N50 Scaffolds 132,848 bp
Longest Scaffold 319,774 bp
Genome Size 1,453,216 bp
Protein Count 1,666
Coding Density 83.41%
GC Percentage 32.47%
Ambiguous Bases N/A
GTDB representative GCA_000696365.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Rickettsia tamurae AT-1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2658108
Country None
Date 2014-8-6
Genbank Assembly Accession GCA_000751075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,664
Refseq Category representative genome
Seq Rel Date 2014/08/06
Spanned Gaps 0
Species Taxid 334545
SSU Count 1
Submitter URMITE
Taxid 334545
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CCMG00000000.1