Clostridium botulinum_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
NCBI Strain Identifiers KAPB-3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000020165.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.4%
CheckM Strain Heterogeneity 60.0
5S Count 13
16S Count 6
23S Count 8
tRNA Count 20
Contig Count 128
N50 Contigs 726,694 bp
Longest Contig 903,881 bp
Scaffold Count 128
N50 Scaffolds 726,694 bp
Longest Scaffold 903,881 bp
Genome Size 3,871,084 bp
Protein Count 3,615
Coding Density 82.90%
GC Percentage 27.28%
Ambiguous Bases N/A
GTDB representative GCA_000020165.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM75005v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03012885
Country USA
Date 2014-09-08
Genbank Assembly Accession GCA_000750055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source kapchunka dried salted whitefish
Latitude Longitude None
Molecule Count 3
CDS Count 3,546
Refseq Category na
Seq Rel Date 2014/09/08
Spanned Gaps 0
Species Taxid 1491
SSU Count 23
Submitter Bureau of Food Surveillance and Science Integration
Taxid 1491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQOK00000000.1