Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Bareilly; x__Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000198
NCBI Strain Identifiers CFSAN000198
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 33.33
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 93
N50 Contigs 153,653 bp
Longest Contig 351,679 bp
Scaffold Count 93
N50 Scaffolds 153,653 bp
Longest Scaffold 351,679 bp
Genome Size 4,574,773 bp
Protein Count 4,276
Coding Density 87.83%
GC Percentage 52.28%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CFSAN000198_01.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01942294
Country Pakistan
Date 2014-9-5
Genbank Assembly Accession GCA_000748165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Kheer Mix
Latitude Longitude None
Molecule Count N/A
CDS Count 4,548
Refseq Category na
Seq Rel Date 2014/09/05
Spanned Gaps 0
Species Taxid 28901
SSU Count 2
Submitter FDA
Taxid 1173452
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JRDX00000000.1