Bacillus amyloliquefaciens
Isolate HQ 23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus amyloliquefaciens
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus amyloliquefaciens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; x__Bacillus subtilis group; x__Bacillus amyloliquefaciens group; s__Bacillus amyloliquefaciens
NCBI Strain Identifiers CMW1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000196735.1)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 1
tRNA Count 20
Contig Count 19
N50 Contigs 898,306 bp
Longest Contig 1,079,383 bp
Scaffold Count 8
N50 Scaffolds 1,073,793 bp
Longest Scaffold 1,767,611 bp
Genome Size 3,908,571 bp
Protein Count 3,971
Coding Density 88.57%
GC Percentage 45.96%
Ambiguous Bases N/A
GTDB representative GCA_000196735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM74770v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00019233
Country Japan:Nara
Date 2014-8-29
Genbank Assembly Accession GCA_000747705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source food
Latitude Longitude 34.672154 N 135.73232 W
Molecule Count N/A
CDS Count 3,924
Refseq Category na
Seq Rel Date 2014/08/29
Spanned Gaps 11
Species Taxid 1390
SSU Count 0
Submitter Graduate School of Agriculture, Kindai University
Taxid 1390
Total Gap Length 10796
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBLH00000000.1