Thermoanaerobacterium saccharolyticum_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Thermoanaerobacteria; o__Thermoanaerobacterales; f__Thermoanaerobacteraceae; g__Thermoanaerobacterium; s__Thermoanaerobacterium saccharolyticum_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Thermoanaerobacterales; f__Thermoanaerobacterales Family III. Incertae Sedis; g__Thermoanaerobacterium; s__Thermoanaerobacterium saccharolyticum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Thermoanaerobacterales; f__Thermoanaerobacterales Family III. Incertae Sedis; g__Thermoanaerobacterium; s__Thermoanaerobacterium saccharolyticum
NCBI Strain Identifiers NTOU1
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.0%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 7
23S Count 9
tRNA Count 20
Contig Count 101
N50 Contigs 59,076 bp
Longest Contig 171,684 bp
Scaffold Count 101
N50 Scaffolds 59,076 bp
Longest Scaffold 171,684 bp
Genome Size 2,833,212 bp
Protein Count 3,113
Coding Density 87.70%
GC Percentage 34.83%
Ambiguous Bases 6
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM74766v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00018622
Country Taiwan
Date 2014-8-23
Genbank Assembly Accession GCA_000747665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Hot vent fluid
Latitude Longitude 24.83 N 122.00 E
Molecule Count N/A
CDS Count 2,842
Refseq Category na
Seq Rel Date 2014/08/23
Spanned Gaps 0
Species Taxid 28896
SSU Count 8
Submitter Lab. of Aqua. Mol. Biol. and Biotech.
Taxid 28896
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBKT00000000.1