Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea vagans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea sp. 9140
NCBI Strain Identifiers 9140
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_004792415.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 3
N50 Contigs 4,167,112 bp
Longest Contig 4,167,112 bp
Scaffold Count 3
N50 Scaffolds 4,167,112 bp
Longest Scaffold 4,167,112 bp
Genome Size 4,839,470 bp
Protein Count 4,447
Coding Density 86.54%
GC Percentage 55.30%
Ambiguous Bases N/A
GTDB representative GCA_004792415.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM74529v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02787012
Country None
Date 2014-8-28
Genbank Assembly Accession GCA_000745295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,452
Refseq Category na
Seq Rel Date 2014/08/28
Spanned Gaps 0
Species Taxid 1500896
SSU Count 7
Submitter DOE Joint Genome Institute
Taxid 1500896
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQNO00000000.1