Methanosarcina mazei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanosarcina; s__Methanosarcina mazei
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanomicrobia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanosarcina; s__Methanosarcina soligelidi
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Methanomicrobia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanosarcina; s__Methanosarcina soligelidi
NCBI Strain Identifiers SMA-21
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000970205.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.65%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 4,064,496 bp
Longest Contig 4,064,496 bp
Scaffold Count 1
N50 Scaffolds 4,064,496 bp
Longest Scaffold 4,064,496 bp
Genome Size 4,064,496 bp
Protein Count 3,461
Coding Density 75.94%
GC Percentage 41.50%
Ambiguous Bases N/A
GTDB representative GCA_000970205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM74431v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02745719
Country None
Date 2014-8-28
Genbank Assembly Accession GCA_000744315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,406
Refseq Category na
Seq Rel Date 2014/08/28
Spanned Gaps 0
Species Taxid 1036677
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1036677
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JQLR00000000.1