Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter fetus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter fetus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter fetus; sb__Campylobacter fetus subsp. venerealis; x__Campylobacter fetus subsp. venerealis 642-21
NCBI Strain Identifiers 642-21
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001816265.1)
Genome Characteristics
CheckM Completeness 99.69%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 127
N50 Contigs 104,146 bp
Longest Contig 234,172 bp
Scaffold Count 126
N50 Scaffolds 104,146 bp
Longest Scaffold 234,172 bp
Genome Size 1,943,569 bp
Protein Count 2,078
Coding Density 92.33%
GC Percentage 33.10%
Ambiguous Bases 1
GTDB representative GCA_001816265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name CfvI642-21_v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03009824
Country Australia: Northern Queensland
Date 2014-8-29
Genbank Assembly Accession GCA_000744025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source organisms were grown from swabs or samples taken from cow genitalia:uterus
Latitude Longitude None
Molecule Count N/A
CDS Count 2,020
Refseq Category na
Seq Rel Date 2014/08/29
Spanned Gaps 1
Species Taxid 196
SSU Count 3
Submitter Centre for Comparative Genomics, Murdoch University
Taxid 1167640
Total Gap Length 56
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJSG00000000.1