Palleronia sp000743715
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Palleronia; s__Palleronia sp000743715
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Maribius; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Maribius; s__Maribius sp. MOLA 401
NCBI Strain Identifiers MOLA 401
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.79%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 33
N50 Contigs 200,895 bp
Longest Contig 868,730 bp
Scaffold Count 33
N50 Scaffolds 200,895 bp
Longest Scaffold 868,730 bp
Genome Size 3,849,771 bp
Protein Count 3,820
Coding Density 87.72%
GC Percentage 67.68%
Ambiguous Bases 397
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM74371v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02997978
Country France: New Caledonia Lagoon
Date 2014-8-26
Genbank Assembly Accession GCA_000743715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source coastal lagoon seawater
Latitude Longitude None
Molecule Count N/A
CDS Count 3,739
Refseq Category na
Seq Rel Date 2014/08/26
Spanned Gaps 0
Species Taxid 1530186
SSU Count 1
Submitter UPMC - Banyuls Observatory
Taxid 1530186
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JQEY00000000.1