Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers PAG
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 10
N50 Contigs 6,029,012 bp
Longest Contig 6,029,012 bp
Scaffold Count 1
N50 Scaffolds 6,820,284 bp
Longest Scaffold 6,820,284 bp
Genome Size 6,820,284 bp
Protein Count 6,276
Coding Density 89.43%
GC Percentage 66.12%
Ambiguous Bases 10
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name PAG
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02870863
Country None
Date 2014-8-25
Genbank Assembly Accession GCA_000743405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,444
Refseq Category na
Seq Rel Date 2014/08/25
Spanned Gaps 9
Species Taxid 287
SSU Count 4
Submitter Los Alamos National Laboratory
Taxid 287
Total Gap Length 900
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JOVK00000000.1