Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium boum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium boum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium boum
NCBI Strain Identifiers LMG 10736
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 18
N50 Contigs 495,453 bp
Longest Contig 643,356 bp
Scaffold Count 18
N50 Scaffolds 495,453 bp
Longest Scaffold 643,356 bp
Genome Size 2,171,356 bp
Protein Count 1,749
Coding Density 85.85%
GC Percentage 59.31%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Bifbou
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02673428
Country None
Date 2014-8-18
Genbank Assembly Accession GCA_000741535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Bovine rumen
Latitude Longitude None
Molecule Count N/A
CDS Count 1,701
Refseq Category na
Seq Rel Date 2014/08/18
Spanned Gaps 0
Species Taxid 78343
SSU Count 1
Submitter University of Parma
Taxid 78343
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JGYQ00000000.1