Bifidobacterium gallicum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium gallicum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium gallicum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium gallicum; x__Bifidobacterium gallicum DSM 20093 = LMG 11596
NCBI Strain Identifiers LMG 11596
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 12
N50 Contigs 327,839 bp
Longest Contig 434,817 bp
Scaffold Count 12
N50 Scaffolds 327,839 bp
Longest Scaffold 434,817 bp
Genome Size 2,004,594 bp
Protein Count 1,561
Coding Density 84.56%
GC Percentage 57.61%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Bifgalcum
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02673434
Country None
Date 2014-8-18
Genbank Assembly Accession GCA_000741205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Adult intestine
Latitude Longitude None
Molecule Count N/A
CDS Count 1,526
Refseq Category representative genome
Seq Rel Date 2014/08/18
Spanned Gaps 0
Species Taxid 78342
SSU Count 2
Submitter University of Parma
Taxid 561180
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JGYW00000000.1