Enterococcus faecalis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecalis
NCBI Strain Identifiers NGS-ED-1009
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000392875.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 13
N50 Contigs 757,884 bp
Longest Contig 974,723 bp
Scaffold Count 13
N50 Scaffolds 757,884 bp
Longest Scaffold 974,723 bp
Genome Size 2,965,426 bp
Protein Count 2,826
Coding Density 87.84%
GC Percentage 37.25%
Ambiguous Bases N/A
GTDB representative GCA_000392875.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM73919v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02947222
Country United Kingdom: Edinburgh; Royal Infirmary Edinburgh; Neonatal unit
Date 2014-8-13
Genbank Assembly Accession GCA_000739195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 55.9231 N 3.1366 W
Molecule Count N/A
CDS Count 2,987
Refseq Category na
Seq Rel Date 2014/08/13
Spanned Gaps 0
Species Taxid 1351
SSU Count 1
Submitter Cork Institute of Technology
Taxid 1351
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPWN00000000.1