Bifidobacterium crudilactis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium crudilactis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium crudilactis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium crudilactis
NCBI Strain Identifiers LMG 23609
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.14%
CheckM Contamination 1.93%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 6
N50 Contigs 1,716,957 bp
Longest Contig 1,716,957 bp
Scaffold Count 6
N50 Scaffolds 1,716,957 bp
Longest Scaffold 1,716,957 bp
Genome Size 2,362,816 bp
Protein Count 1,911
Coding Density 87.03%
GC Percentage 57.72%
Ambiguous Bases 8
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM73800v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02699097
Country France
Date 2014-8-6
Genbank Assembly Accession GCA_000738005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source raw cow milk
Latitude Longitude None
Molecule Count N/A
CDS Count 1,885
Refseq Category representative genome
Seq Rel Date 2014/08/06
Spanned Gaps 0
Species Taxid 327277
SSU Count 1
Submitter University of Liege
Taxid 327277
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JHAL00000000.1