Flavobacterium gilvum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium gilvum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium gilvum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium gilvum
NCBI Strain Identifiers EM1308
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001761465.1)
Genome Characteristics
CheckM Completeness 98.94%
CheckM Contamination 1.74%
CheckM Strain Heterogeneity 44.44
5S Count 1
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 215
N50 Contigs 44,754 bp
Longest Contig 188,555 bp
Scaffold Count 215
N50 Scaffolds 44,754 bp
Longest Scaffold 188,555 bp
Genome Size 4,321,991 bp
Protein Count 3,561
Coding Density 87.47%
GC Percentage 35.10%
Ambiguous Bases 21
GTDB representative GCA_001761465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM73553v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02797832
Country South Korea: Bukhan Mountain
Date 2014-7-28
Genbank Assembly Accession GCA_000735535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fresh water
Latitude Longitude 37.36 N 126.59 E
Molecule Count N/A
CDS Count 3,492
Refseq Category na
Seq Rel Date 2014/07/28
Spanned Gaps 0
Species Taxid 1492737
SSU Count 2
Submitter Chunlab, Inc.
Taxid 1492737
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JNCP00000000.1