Nitratireductor_A basaltis_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Nitratireductor_A; s__Nitratireductor_A basaltis_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Phyllobacteriaceae; g__Nitratireductor; s__Nitratireductor basaltis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Phyllobacteriaceae; g__Nitratireductor; s__Nitratireductor basaltis
NCBI Strain Identifiers UMTGB225
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 5
N50 Contigs 2,562,966 bp
Longest Contig 2,562,966 bp
Scaffold Count 5
N50 Scaffolds 2,562,966 bp
Longest Scaffold 2,562,966 bp
Genome Size 3,551,806 bp
Protein Count 3,455
Coding Density 91.03%
GC Percentage 59.81%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM73372v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02739848
Country Malaysia: Bidong Island; Terengganu
Date 2014-7-25
Genbank Assembly Accession GCA_000733725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 5.83 N 103.05 E
Molecule Count N/A
CDS Count 3,399
Refseq Category representative genome
Seq Rel Date 2014/07/25
Spanned Gaps 0
Species Taxid 472175
SSU Count 1
Submitter Monash University Malaysia
Taxid 472175
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMQM00000000.1