Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Mycoplasmatales; f__Mycoplasmoidaceae; g__Malacoplasma; s__Malacoplasma iowae
Filtered NCBI Taxonomy d__Bacteria; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Mycoplasma; s__Mycoplasma iowae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Mycoplasma; s__Mycoplasma iowae; x__Mycoplasma iowae DK-CPA
NCBI Strain Identifiers DK-CPA
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900660615.1)
Genome Characteristics
CheckM Completeness 98.72%
CheckM Contamination 1.92%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 89
N50 Contigs 25,572 bp
Longest Contig 60,223 bp
Scaffold Count 89
N50 Scaffolds 25,572 bp
Longest Scaffold 60,223 bp
Genome Size 1,184,115 bp
Protein Count 963
Coding Density 88.68%
GC Percentage 24.49%
Ambiguous Bases 4
GTDB representative GCA_900660615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name MycoIowaeDkcpa1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02335083
Country None
Date 2014-7-25
Genbank Assembly Accession GCA_000733685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source tracheae; air sacs; and pericardial regions from turkey embryos
Latitude Longitude None
Molecule Count N/A
CDS Count 940
Refseq Category na
Seq Rel Date 2014/07/25
Spanned Gaps 0
Species Taxid 2116
SSU Count 1
Submitter University of Alabama at Birmingham
Taxid 1394179
Total Gap Length 0
Translation Table 4
tRNA Count (total) 29
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AWQU00000000.1