Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus
NCBI Strain Identifiers MRSA_P1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.09%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 180
N50 Contigs 50,662 bp
Longest Contig 219,931 bp
Scaffold Count 180
N50 Scaffolds 50,662 bp
Longest Scaffold 219,931 bp
Genome Size 2,840,742 bp
Protein Count 2,746
Coding Density 84.22%
GC Percentage 32.76%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name MRSA_P1_CLCBio_denovo
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3139071
Country Germany
Date 2014-7-14
Genbank Assembly Accession GCA_000731275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,992
Refseq Category na
Seq Rel Date 2014/07/14
Spanned Gaps 0
Species Taxid 1280
SSU Count 1
Submitter IFH_MS
Taxid 46170
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBYW000000000.1