Halobacillus karajensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Halobacillaceae; g__Halobacillus; s__Halobacillus karajensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Halobacillus; s__Halobacillus karajensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Halobacillus; s__Halobacillus karajensis
NCBI Strain Identifiers HD-03
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900108515.1)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 4
23S Count 6
tRNA Count 20
Contig Count 13
N50 Contigs 626,908 bp
Longest Contig 1,773,830 bp
Scaffold Count 12
N50 Scaffolds 626,908 bp
Longest Scaffold 1,773,830 bp
Genome Size 4,036,026 bp
Protein Count 4,010
Coding Density 83.95%
GC Percentage 41.57%
Ambiguous Bases N/A
GTDB representative GCA_900108515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name PRJEB5509_assembly_1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3139065
Country None
Date 2014-7-9
Genbank Assembly Accession GCA_000731155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,906
Refseq Category na
Seq Rel Date 2014/07/09
Spanned Gaps 1
Species Taxid 195088
SSU Count 6
Submitter URMITE
Taxid 195088
Total Gap Length 11
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CCDI000000000.1