Citrobacter_A amalonaticus
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter_A; s__Citrobacter_A amalonaticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter amalonaticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter amalonaticus
NCBI Strain Identifiers L8A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900460855.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.8%
CheckM Strain Heterogeneity 10.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 110
N50 Contigs 115,086 bp
Longest Contig 489,429 bp
Scaffold Count 110
N50 Scaffolds 115,086 bp
Longest Scaffold 489,429 bp
Genome Size 5,273,145 bp
Protein Count 5,014
Coding Density 88.70%
GC Percentage 53.12%
Ambiguous Bases N/A
GTDB representative GCA_900460855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM73105v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02726357
Country Malaysia
Date 2014-7-18
Genbank Assembly Accession GCA_000731055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source dental plaque
Latitude Longitude None
Molecule Count N/A
CDS Count 5,144
Refseq Category na
Seq Rel Date 2014/07/18
Spanned Gaps 0
Species Taxid 35703
SSU Count 1
Submitter University of Malaya
Taxid 35703
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMQQ00000000.1