Clostridium_F botulinum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_F; s__Clostridium_F botulinum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
NCBI Strain Identifiers CDC52271
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001276985.1)
Genome Characteristics
CheckM Completeness 98.52%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 100.0
5S Count 7
16S Count 6
23S Count 7
tRNA Count 19
Contig Count 399
N50 Contigs 16,863 bp
Longest Contig 100,640 bp
Scaffold Count 399
N50 Scaffolds 16,863 bp
Longest Scaffold 100,640 bp
Genome Size 3,890,459 bp
Protein Count 3,845
Coding Density 81.87%
GC Percentage 28.19%
Ambiguous Bases 14
GTDB representative GCA_001276985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM73079v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02664951
Country USA: Indiana
Date 2014-07-18
Genbank Assembly Accession GCA_000730795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source chili sauce
Latitude Longitude None
Molecule Count N/A
CDS Count 3,736
Refseq Category na
Seq Rel Date 2014/07/18
Spanned Gaps 0
Species Taxid 1491
SSU Count 11
Submitter Centers for Disease Control and Prevention
Taxid 1491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JFGF00000000.1