Pseudomonas_E fluorescens_X
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E fluorescens_X
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas fluorescens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas fluorescens group; s__Pseudomonas fluorescens
NCBI Strain Identifiers UK4
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.64%
CheckM Contamination 1.06%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 6,064,456 bp
Longest Contig 6,064,456 bp
Scaffold Count 1
N50 Scaffolds 6,064,456 bp
Longest Scaffold 6,064,456 bp
Genome Size 6,064,456 bp
Protein Count 5,421
Coding Density 88.62%
GC Percentage 60.13%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM73042v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02900729
Country Denmark: Aalborg
Date 2014-7-17
Genbank Assembly Accession GCA_000730425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 57.0270 N 9.9447 E
Molecule Count 1
CDS Count 5,457
Refseq Category na
Seq Rel Date 2014/07/17
Spanned Gaps 0
Species Taxid 294
SSU Count 6
Submitter Aalborg University
Taxid 294
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None