Bifidobacterium longum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum; sb__Bifidobacterium longum subsp. longum; x__Bifidobacterium longum subsp. longum 7-1B
NCBI Strain Identifiers 7-1B
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000196555.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 37
N50 Contigs 435,415 bp
Longest Contig 831,546 bp
Scaffold Count 34
N50 Scaffolds 435,415 bp
Longest Scaffold 856,996 bp
Genome Size 2,407,087 bp
Protein Count 1,963
Coding Density 87.62%
GC Percentage 59.82%
Ambiguous Bases 8
GTDB representative GCA_000196555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM73005v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02862992
Country Russia: Moscow
Date 2014-7-16
Genbank Assembly Accession GCA_000730055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool sample
Latitude Longitude None
Molecule Count N/A
CDS Count 2,015
Refseq Category na
Seq Rel Date 2014/07/16
Spanned Gaps 3
Species Taxid 216816
SSU Count 1
Submitter Pirogov Russian National Research Medical University
Taxid 1350472
Total Gap Length 232
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNVY00000000.1