Kaistella antarcticum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Weeksellaceae; g__Kaistella; s__Kaistella antarcticum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Chryseobacterium; s__Chryseobacterium antarcticum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Chryseobacterium; s__Chryseobacterium antarcticum
NCBI Strain Identifiers LMG 24720
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900109615.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.14%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 4
N50 Contigs 2,264,138 bp
Longest Contig 2,264,138 bp
Scaffold Count 4
N50 Scaffolds 2,264,138 bp
Longest Scaffold 2,264,138 bp
Genome Size 3,123,663 bp
Protein Count 2,850
Coding Density 89.15%
GC Percentage 36.08%
Ambiguous Bases N/A
GTDB representative GCA_900109615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM72998v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02899065
Country Antarctica: Prince George Island; King Sejong Station
Date 2014-7-16
Genbank Assembly Accession GCA_000729985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 2,840
Refseq Category representative genome
Seq Rel Date 2014/07/16
Spanned Gaps 0
Species Taxid 266748
SSU Count 1
Submitter Lycoming College
Taxid 266748
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPEP00000000.1