Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Oenococcus; s__Oenococcus oeni
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Oenococcus; s__Oenococcus oeni
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Oenococcus; s__Oenococcus oeni
NCBI Strain Identifiers OT25
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000372485.1)
Genome Characteristics
CheckM Completeness 98.66%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 61
N50 Contigs 108,808 bp
Longest Contig 375,641 bp
Scaffold Count 61
N50 Scaffolds 108,808 bp
Longest Scaffold 375,641 bp
Genome Size 1,834,661 bp
Protein Count 1,931
Coding Density 88.77%
GC Percentage 37.92%
Ambiguous Bases N/A
GTDB representative GCA_000372485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM72503v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02894449
Country Italy: Foggia
Date 2014-7-11
Genbank Assembly Accession GCA_000725035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nero di Troia red wine (vintage 2007) undergoing spontaneous MLF and collected from three different vinifications performed in the same winery
Latitude Longitude 41.45 N 15.533333 E
Molecule Count N/A
CDS Count 1,846
Refseq Category na
Seq Rel Date 2014/07/11
Spanned Gaps 0
Species Taxid 1247
SSU Count 1
Submitter University of Foggia
Taxid 1247
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPEM00000000.1