Streptococcus parasanguinis_B
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus parasanguinis_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus parasanguinis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus parasanguinis
NCBI Strain Identifiers C1A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000963275.1)
Genome Characteristics
CheckM Completeness 96.83%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 17
Contig Count 79
N50 Contigs 39,293 bp
Longest Contig 103,007 bp
Scaffold Count 79
N50 Scaffolds 39,293 bp
Longest Scaffold 103,007 bp
Genome Size 2,039,661 bp
Protein Count 1,969
Coding Density 88.66%
GC Percentage 42.00%
Ambiguous Bases N/A
GTDB representative GCA_000963275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM72464v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02768894
Country Malaysia: Kuala Lumpur
Date 2014-07-08
Genbank Assembly Accession GCA_000724645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude 3.113648 N 101.653456 E
Molecule Count 2
CDS Count 2,010
Refseq Category na
Seq Rel Date 2014/07/08
Spanned Gaps 0
Species Taxid 1318
SSU Count 2
Submitter University of Malaya
Taxid 1318
Total Gap Length 0
Translation Table 11
tRNA Count (total) 34
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMRV00000000.1