Clostridium_I pasteurianum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_I; s__Clostridium_I pasteurianum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium pasteurianum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium pasteurianum; x__Clostridium pasteurianum DSM 525 = ATCC 6013
NCBI Strain Identifiers ATCC 6013
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000807255.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 10
23S Count 10
tRNA Count 20
Contig Count 2
N50 Contigs 4,373,654 bp
Longest Contig 4,373,654 bp
Scaffold Count 2
N50 Scaffolds 4,373,654 bp
Longest Scaffold 4,373,654 bp
Genome Size 4,386,898 bp
Protein Count 4,050
Coding Density 82.59%
GC Percentage 29.95%
Ambiguous Bases N/A
GTDB representative GCA_000807255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM72420v3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01821297
Country USA
Date 2015-11-17
Genbank Assembly Accession GCA_000724205.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,962
Refseq Category na
Seq Rel Date 2015/11/17
Spanned Gaps 0
Species Taxid 1501
SSU Count 10
Submitter Oak Ridge National Laboratory
Taxid 1262449
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JPGY00000000.2