Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Photorhabdus; s__Photorhabdus thracensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Photorhabdus; s__Photorhabdus temperata
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Photorhabdus; s__Photorhabdus temperata; sb__Photorhabdus temperata subsp. temperata; x__Photorhabdus temperata subsp. temperata Meg1
NCBI Strain Identifiers Meg1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001010285.1)
Genome Characteristics
CheckM Completeness 98.38%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 18
Contig Count 127
N50 Contigs 72,332 bp
Longest Contig 238,875 bp
Scaffold Count 127
N50 Scaffolds 72,332 bp
Longest Scaffold 238,875 bp
Genome Size 4,931,447 bp
Protein Count 4,349
Coding Density 84.46%
GC Percentage 43.18%
Ambiguous Bases N/A
GTDB representative GCA_001010285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Meg1v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02338775
Country USA: Ohio
Date 2014-7-8
Genbank Assembly Accession GCA_000722995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bacterial symbiont of Heterorhabdis megidis nematodes
Latitude Longitude None
Molecule Count N/A
CDS Count 4,351
Refseq Category na
Seq Rel Date 2014/07/08
Spanned Gaps 0
Species Taxid 574560
SSU Count 0
Submitter University of New Hampshire
Taxid 1393735
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGVH00000000.1