Streptosporangium amethystogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptosporangiales; f__Streptosporangiaceae; g__Streptosporangium; s__Streptosporangium amethystogenes
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptosporangiales; f__Streptosporangiaceae; g__Streptosporangium; s__Streptosporangium amethystogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptosporangiales; f__Streptosporangiaceae; g__Streptosporangium; s__Streptosporangium amethystogenes
NCBI Strain Identifiers NRRL B-2639
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.82%
CheckM Contamination 1.23%
CheckM Strain Heterogeneity 50.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 229
N50 Contigs 225,860 bp
Longest Contig 782,858 bp
Scaffold Count 229
N50 Scaffolds 225,860 bp
Longest Scaffold 782,858 bp
Genome Size 9,441,077 bp
Protein Count 8,715
Coding Density 86.85%
GC Percentage 69.42%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM72107v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645242
Country Japan: Yamanashi Pref.
Date 2014-07-02
Genbank Assembly Accession GCA_000721075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 8,502
Refseq Category representative genome
Seq Rel Date 2014/07/02
Spanned Gaps 0
Species Taxid 2002
SSU Count 1
Submitter University of Illinois
Taxid 2002
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JOEQ00000000.1