Streptomyces halstedii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces halstedii
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces halstedii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; x__Streptomyces griseus group; x__Streptomyces halstedii subgroup; s__Streptomyces halstedii
NCBI Strain Identifiers NRRL ISP-5068
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (12 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 1.51%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 105
N50 Contigs 273,680 bp
Longest Contig 533,993 bp
Scaffold Count 105
N50 Scaffolds 273,680 bp
Longest Scaffold 533,993 bp
Genome Size 7,740,838 bp
Protein Count 6,780
Coding Density 86.84%
GC Percentage 71.92%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM72053v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645380
Country None
Date 2014-07-02
Genbank Assembly Accession GCA_000720535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,798
Refseq Category na
Seq Rel Date 2014/07/02
Spanned Gaps 0
Species Taxid 1944
SSU Count 1
Submitter University of Illinois
Taxid 1944
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JOAZ00000000.1