Streptomyces varsoviensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces varsoviensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces varsoviensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces varsoviensis
NCBI Strain Identifiers NRRL B-3589
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000718635.1)
Genome Characteristics
CheckM Completeness 99.11%
CheckM Contamination 3.56%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 155
N50 Contigs 246,757 bp
Longest Contig 554,932 bp
Scaffold Count 155
N50 Scaffolds 246,757 bp
Longest Scaffold 554,932 bp
Genome Size 8,595,093 bp
Protein Count 7,284
Coding Density 86.39%
GC Percentage 72.40%
Ambiguous Bases N/A
GTDB representative GCA_000718635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71925v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645265
Country None
Date 2014-07-02
Genbank Assembly Accession GCA_000719255.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,328
Refseq Category na
Seq Rel Date 2014/07/02
Spanned Gaps 0
Species Taxid 67373
SSU Count 3
Submitter University of Illinois
Taxid 67373
Total Gap Length 0
Translation Table 11
tRNA Count (total) 69
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JOFN00000000.1