Lentzea aerocolonigenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Lentzea; s__Lentzea aerocolonigenes
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Pseudonocardiales; f__Pseudonocardiaceae; g__Lechevalieria; s__Lentzea aerocolonigenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Pseudonocardiales; f__Pseudonocardiaceae; g__Lechevalieria; s__Lentzea aerocolonigenes
NCBI Strain Identifiers NRRL B-3298
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000974445.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 1.77%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 4
tRNA Count 20
Contig Count 204
N50 Contigs 163,428 bp
Longest Contig 479,707 bp
Scaffold Count 204
N50 Scaffolds 163,428 bp
Longest Scaffold 479,707 bp
Genome Size 10,648,728 bp
Protein Count 9,939
Coding Density 91.58%
GC Percentage 68.95%
Ambiguous Bases N/A
GTDB representative GCA_000974445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71920v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645260
Country Japan: Nagasaki City
Date 2014-07-02
Genbank Assembly Accession GCA_000719205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 9,786
Refseq Category na
Seq Rel Date 2014/07/02
Spanned Gaps 0
Species Taxid 68170
SSU Count 3
Submitter University of Illinois
Taxid 68170
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JOFI00000000.1