Streptomyces rimosus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus; sb__Streptomyces rimosus subsp. rimosus
NCBI Strain Identifiers NRRL WC-3874
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000717285.1)
Genome Characteristics
CheckM Completeness 99.88%
CheckM Contamination 2.45%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 619
N50 Contigs 61,988 bp
Longest Contig 220,044 bp
Scaffold Count 619
N50 Scaffolds 61,988 bp
Longest Scaffold 220,044 bp
Genome Size 9,551,326 bp
Protein Count 8,833
Coding Density 86.87%
GC Percentage 71.95%
Ambiguous Bases 3
GTDB representative GCA_000717285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71871v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645400
Country None
Date 2014-07-02
Genbank Assembly Accession GCA_000718715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 8,687
Refseq Category na
Seq Rel Date 2014/07/02
Spanned Gaps 0
Species Taxid 1927
SSU Count 1
Submitter University of Illinois
Taxid 132474
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JOBT00000000.1